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The IUP Journal of Genetics & Evolution
Some Investigations on Sampling Variance of Genetic Correlation
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The present investigation is an attempt to compare the estimated, predicted, empirical and bootstrap Standard Errors (SE) for different combinations of population heritability, genetic and phenotypic correlations for different family sizes and structures under half-sib mating design. The data under half-sib model are simulated by taking sire effects following normal as well as gamma distribution. It is observed that the empirical SE of genetic correlation, when sire effects are from gamma distribution, are invariably higher as compared to the data with sire effects following normal distribution irrespective of the sample size, heritability and genetic correlation of the traits. The empirical SE of estimates of genetic correlation are very high for lowly heritable traits for whole range of genetic correlation. The large sample approximation of SE given by Tallis is always underestimating the SE even for large family size of 30 to 50 and should not be used in practice. Barring small sample size, the bootstrap estimates of SE are very close to predicted SE and can be used as an estimate of SE of genetic correlation. The bootstrap estimates of SE of genetic correlation are found to be very close to the predicted SE for sample size 500 and above in case of lowly heritable traits for whole range of genetic correlation. In case of moderately and highly heritable traits, the bootstrap estimates of SE are found very close to predicted SE for all values of genetic correlation and for all the sample sizes and family structures except for small sample size with moderately heritable traits. Hence, it can be concluded that the bootstrap estimates of SE which are very close to predicted values can be used to estimate the SE instead of approximate formulae given in literature. It is also found that in case of non-normal datasets with sire effects following gamma distribution the bootstrap estimates of SE of genetic correlation are always underestimated.

 
 
 

The genetic correlation between two characters is of considerable importance both from the application of quantitative genetic theory in artificial selection and understanding the evolutionary processes in natural selection (Lande and Arnold, 1983; and Falconer, 1989). In any estimation procedure, it is necessary to estimate both the statistics and the associated Standard Error (SE) and confidence limits. The estimation of SE and confidence limits for the genetic correlation is approximate and particularly in situations where statistical behavior is not well understood (Robertson, 1959 and 1960; and Tallis, 1959). Roff and Preziosi (1994) used the resampling method for estimation of the genetic correlation which is robust to the underlying statistical distribution properties. The availability of different approximations of sampling variance of genetic correlation in literature makes the task of choosing the appropriate formulae more difficult for researchers. Further there is no information on how good are these estimates and what to do when the estimates of genetic parameters appearing in these expressions are outside the parametric space? Keeping in view the above confusions and importance of sampling variance of the estimates of genetic correlation, an attempt was made to compare the estimated, predicted, empirical and bootstrap estimates of SE for different combinations of population heritabilities, genetic correlation and phenotypic correlations under normal and non-normal situations.

The simulation model for half-sib family design of Ronningen (1974) was used to generate the data with the given genetic parameters (i.e., heritabilities, genetic and phenotypic correlations). The traditional method of estimating the heritability and genetic correlation is through the series of nested ANOVA.

 
 
 

Genetics & Evolution Journal, Genetic Correlation, Evolutionary Processes, Standard Errors, Statistical Distribution Properties, Genetic Parameters, Gamma Distributions, Heritable Traits, Normal Datasets, Bootstrap Samples.